Selected Publications

You can also find my full publication list on my Google Scholar profile.

Preprints

Boxiang Yun, Yan Wang, Jieneng Chen, Huiyu Wang, Wei Shen, Qingli Li. SpecTr: Spectral Transformer for Hyperspectral Pathology Image Segmentation. arXiv:2103.03604. (PDF)

Conference

Xintian Mao, Yiming Liu, Fengze Liu, Qingli Li, Wei Shen, Yan Wang. Intriguing Findings of Frequency Selection for Image Deblurring. AAAI Conference on Artificial Intelligence (AAAI), 2023.​ (PDF) (CODE)

Xingran Xie, Yan Wang, Qingli Li. S3R: Self-supervised Spectral Regression for Hyperspectral Histopathology Image Classification. International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), 2022.​ (PDF)

Xuehui Wang, Kai Zhao, Ruixin Zhang, Shouhong Ding, Yan Wang, Wei Shen. ContrastMask: Contrastive Learning to Segment Every Thing. IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2022.​ (PDF) (CODE)

Yuan Yao, Fengze Liu, Zongwei Zhou, Yan Wang, Wei Shen, Alan Yuille, Yongyi Lu. Unsupervised Domain Adaptation through Shape Modeling for Medical Image Segmentation. Medical Imaging with Deep Learning (MIDL), 2022.​ (PDF)

Jieneng Chen, Yongyi Lu, Qihang Yu, Xiangde Luo, Ehsan Adeli, Yan Wang, Le Lu, Alan Yuille, Yuyin Zhou. TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation. ICML Workshop on IMLH, 2021.​ (PDF) (CODE)

Shuhao Fu, Yongyi Lu, Yan Wang, Yuyin Zhou, Wei Shen, Elliot Fishman, Alan Yuille. Domain Adaptive Relational Reasoning for 3D Multi-Organ Segmentation. International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), 2020. (PDF)

Yan Wang, Xu Wei, Fengze Liu, Jieneng Chen, Yuyin Zhou, Wei Shen, Elliot Fishman, Alan Yuille. Deep Distance Transform for Tubular Structure Segmentation in CT Scans. IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2020 [Oral]. (PDF)

Zhishuai Zhang, Wei Shen, Siyuan Qiao, Yan Wang, Bo Wang, Alan Yuille. Robust Face Detection via Learning Small Faces on Hard Images. IEEE Winter Conference on Applications of Computer Vision (WACV), 2020. (PDF) (CODE)

Yuyin Zhou, Yan Wang, Peng Tang, Song Bai, Wei Shen, Elliot K. Fishman, Alan Yuille. Semi-Supervised 3D Multi-Organ Segmentation via Deep Multi-Planar Co-Training. IEEE Winter Conference on Applications of Computer Vision (WACV), 2019. (PDF)

Yuyin Zhou, Yingwei Li, Zhishuai Zhang, Yan Wang, Angtian Wang, Elliot Fishman, Alan Yuille, Seyoun Park. Hyper-pairing Network for Multi-phase Pancreatic Ductal Adenocarcinoma Segmentation. International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), 2019.​(PDF)

Wei Shen, Yilu Guo, Yan Wang, Kai Zhao, Bo Wang, Alan Yuille. Deep Regression Forests for Age Estimation. IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2018. (PDF) (CODE)

Qihang Yu, Lingxi Xie, Yan Wang, Yuyin Zhou, Elliot Fishman, Alan Yuille. Recurrent Saliency Transformation Network: Incorporating Multi-Stage Visual Cues for Small Organ Segmentationd. IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2018. (PDF) (CODE)

Yan Wang, Yuyin Zhou, Peng Tang, Wei Shen, Elliot K. Fishman, Alan Yuille. Training Multi-organ Segmentation Networks with Sample Selection by Relaxed Upper Confident Bound. International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), 2018 [Oral]. (PDF)

Wei Shen, Bin Wang, Yuan Jiang, Yan Wang, Alan Yuille. Multi-stage Multi-recursive-input Fully Convolutional Networks for Neuronal Boundary Detection. IEEE International Conference on Computer Vision (ICCV), 2017. (PDF) (CODE)

Fabian Benitez-Quiroz, Yan Wang, Aleix M. Martinez. Recognition of Action Units in the Wild with Deep Nets and a New Global-Local Loss. IEEE International Conference on Computer Vision (ICCV), 2017 (PDF)

Yuyin Zhou, Lingxi Xie, Wei Shen, Yan Wang, Elliot Fishman, Alan Yuille. A Fixed-Point Model for Pancreas Segmentation in Abdominal CT Scans. International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), 2017. (PDF) (CODE) ​

Wei Shen, Kai Zhao, Yuan Jiang, Yan Wang, Zhijiang Zhang, Xiang Bai. Object Skeleton Extraction in Natural Images by Fusing Scale-associated Deep Side Outputs. IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2016.(PDF) (Supplementary Material) (CODE) (PR-curve Data) (SK-SMALL Dataset)

Wei Shen, Xinggang Wang, Yan Wang, Xiang Bai, Zhijiang Zhang. DeepContour: A Deep Convolutional Feature Learned by Positive-sharing Loss for Contour Detection. IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 2015. (PDF) (CODE) (Pre-computed Result on BSDS500) (PR-curve Data)

Yan Wang, Sheng Li, Alex C. Kot. Joint Learning for Image-based Handbag Recommendation. IEEE International Conference on Multimedia and Expo (ICME), 2015 [Oral]. (PDF)

Yan Wang, Sheng Li, Alex C. Kot. Complementary Feature Extraction for Branded Handbag Recognition. IEEE International Conference on Image Processing (ICIP), 2014. (PDF)

Journal

Michela Antonelli, Annika Reinke, Spyridon Bakas, Keyvan Farahani, AnnetteKopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern Menze, Olaf Ronneberger, Ronald M.Summers, Bram van Ginneken, Michel Bilello, Patrick Bilic, Patrick F. Christ, Richard K. G. Do, Marc J. Gollub, Stephan H. Heckers, Henkjan Huisman, William R. Jarnagin, Maureen K. McHugo, Sandy Napel, Jennifer S. Goli Pernicka, Kawal Rhode, Catalina Tobon-Gomez, Eugene Vorontsov, Henkjan Huisman, James A. Meakin, Sebastien Ourselin, Manuel Wiesenfarth, Pablo Arbelaez, Byeonguk Bae, Sihong Chen, Laura Daza, Jianjiang Feng, Baochun He, Fabian Isensee, Yuanfeng Ji, Fucang Jia, Namkug Kim, Ildoo Kim, Dorit Merhof, Akshay Pai, Beomhee Park, Mathias Perslev, Ramin Rezaiifar, Oliver Rippel, Ignacio Sarasua, Wei Shen, Jaemin Son, Christian Wachinger, Liansheng Wang, Yan Wang, Yingda Xia, Daguang Xu, Zhanwei Xu, Yefeng Zheng, Amber L. Simpson, Lena Maier-Hein, M. Jorge Cardoso. The Medical Segmentation Decathlon. Nature Communications, 2022. (PDF)

Yuyin Zhou, David Dreizin, Yan Wang, Fengze Liu, Wei Shen, Alan Yuille. External Attention Assisted Multi-Phase Splenic Vascular Injury Segmentation with Limited Data. IEEE Trans. Medical Imaging, 41(6): 1346-1357, 2022. (PDF)

Yan Wang, Peng Tang, Yuyin Zhou, Wei Shen, Elliot K. Fishman, Alan Yuille. Learning Inductive Attention Guidance for Partially Supervised Pancreatic Ductal Adenocarcinoma Prediction. IEEE Trans. Medical Imaging, 43(2): 2723-2735, 2021. (PDF)

Qian Wang, Li Sun, Yan Wang, Mei Zhou, Menghan Hu, Jiangang Chen, Ying Wen, Qingli Li. Identification of Melanoma From Hyperspectral Pathology Image Using 3D Convolutional Networks. IEEE Trans. Medical Imaging, 40(1): 218-227, 2021. (PDF)

Wei Shen, Yilu Guo, Yan Wang, Kai Zhao, Bo Wang, Alan Yuille. Deep Differentiable Random Forests for Age Estimation. IEEE Trans. Pattern Analysis and Machine Intelligence, 43(2): 404-419, 2021. (PDF) (CODE)

Lingxi Xie, Qihang Yu, Yuyin Zhou, Yan Wang, Elliot Fishman and Alan Yuille. Recurrent Saliency Transformation Network for Tiny Target Segmentation in Abdominal CT Scans. IEEE Trans. Medical Imaging, 39(2): 514-525, 2020. (PDF) (CODE)

Yan Wang, Yuyin Zhou, Wei Shen, Seyoun Park, Elliot K. Fishman, Alan Yuille. Abdominal multi-organ segmentation with organ-attention networks and statistical fusion. Medical Image Analysis, 55: 88-102, 2019. (PDF)

Ruiqi Zhao, Yan Wang, Aleix M. Martinez. A Simple, Fast and Highly-Accurate Algorithm to Recover 3D Shape from 2D Landmarks on a Single Image. IEEE Trans. Pattern Analysis and Machine Intelligence, 40(12): 3059-3066, 2017. (PDF)

Wei Shen, Kai Zhao, Yuan Jiang, Yan Wang, Xiang Bai, Alan Yuille. DeepSkeleton: Learning Multi-task Scale-associated Deep Side Outputs for Object Skeleton Extraction in Natural Images. IEEE Trans. Image Processing, 26(11): 5298 - 5311, 2017. (PDF) (Project Page) (CODE) (SK-LARGE Dataset)

Yan Wang, Sheng Li, Alex C. Kot. On Branded Handbag Recognition. IEEE Trans. Multimedia, 18(9): 1869-1881, 2016. (PDF)

Yan Wang, Sheng Li, Alex C. Kot. DeepBag: Recognizing Handbag Models. IEEE Trans. Multimedia, 17(11): 2072-2083, 2015. (PDF)

Wei Shen, Yan Wang, Xiang Bai, Hongyuan Wang, Longin Jan Latecki. Shape Clustering: Common Structure Discovery. Pattern Recognition, 46(2): 539-550, 2013. (PDF) (CODE)

Book Chapter

Wei Shen, Kai Zhao, Yuan Jiang, Yan Wang, Zhijiang Zhang, Xiang Bai. Skeletonization in Natural Images and Its Application to Object Recognition, in “Skeletonization: Theory, Methods, and Applications”, Punam Saha, Gunilla Borgefors, Gabriella Sanniti di Baja (Ed.), Academic Press, 2017. ISBN: 978-0-081-01291-8.

Yuyin Zhou, Qihang Yu, Yan Wang, Lingxi Xie, Wei Shen, Elliot K.Fishman, Alan Yuille. 2D-Based Coarse-to-Fine Approaches for Small Target Segmentation in Abdominal CT Scans, in “Deep Learning and Convolutional Neural Networks for Medical Imaging and Clinical Informatics”, Le Lu, Xiaosong Wang, Gustavo Carneiro, Lin Yang (Ed.), Springer, 2019.ISBN 978-3-030-13969-8.